IHGA

IHGA performs integrative analysis of gene mRNA expression across large-scale hepatocellular carcinoma (HCC) datasets to enable discovery of biomarkers and therapeutic targets.


Key Features:

  • Extensive Data Repository: Contains over 100 independent HCC patient-derived datasets encompassing more than 10,000 tissue samples and data from over 90 cell models.
  • Comprehensive Analytical Capabilities: Performs large-scale analyses of gene mRNA levels including expression comparison, correlation analysis, clinical characteristics analysis, survival analysis, immune interaction analysis, and drug sensitivity analysis.
  • Enhanced Clinical Data Integration: Integrates enriched clinical parameters with molecular data to support nuanced analyses of gene–clinical associations.
  • AI-Assisted Gene Screening: Applies artificial intelligence, including natural language models, to assist gene screening and identification workflows.

Scientific Applications:

  • Biomarker discovery: Identification of novel gene expression biomarkers associated with HCC.
  • Therapeutic target identification: Prioritization of potential therapeutic targets based on expression, clinical correlation, and drug sensitivity analyses.
  • Clinical outcome exploration: Exploration of gene expression patterns in relation to clinical outcomes such as survival and other clinical characteristics.

Methodology:

Integration of >100 independent HCC patient-derived datasets and >90 cell-model datasets, large-scale analyses of gene mRNA levels (expression, correlation, survival, immune interaction, drug sensitivity), and application of AI technologies including natural language models for gene screening.

Topics

Details

License:
CC-BY-4.0
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
2/12/2024
Last Updated:
11/24/2024

Operations

Publications

Zhang Q, Hu W, Xiong L, Wen J, Wei T, Yan L, Liu Q, Zhu S, Bai Y, Zeng Y, Yin Z, Yang J, Zhang W, Wu M, Zhang Y, Peng G, Bao S, Liu L. IHGA: An interactive web server for large-scale and comprehensive discovery of genes of interest in hepatocellular carcinoma. Computational and Structural Biotechnology Journal. 2023;21:3987-3998. doi:10.1016/j.csbj.2023.08.003. PMID:37635767. PMCID:PMC10457689.