ImageM

ImageM provides processing, visualization, and analysis of multi-dimensional bio-imaging data, including 2D/3D spatial configurations, temporal sequences, and multi-channel/multi-variate datasets to support quantitative bio-image analysis.


Key Features:

  • Visualization: Supports rendering and exploration of 2D/3D spatial, temporal, and multi-channel image data.
  • Image processing algorithms: Includes a comprehensive collection of image processing algorithms for analytical tasks in bio-image analysis.
  • Spatial calibration management: Manages spatial calibration data for accurate quantitative imaging analyses.
  • Multi-variate image analysis: Provides facilities for analyzing multi-variate and multi-channel images.
  • Cross-platform compatibility: Operates within Matlab and Octave environments.

Scientific Applications:

  • High-dimensional bio-image analysis: Applied to analysis of high-dimensional imaging data from modern microscopy and imaging devices.
  • Quantitative imaging: Enables quantitative imaging analyses that rely on spatial calibration.
  • Multi-channel and temporal data analysis: Supports analysis workflows for temporal sequences and multi-channel/multi-variate image datasets.

Methodology:

Implements image processing algorithms, spatial calibration management, multi-variate image analysis, and visualization for multi-dimensional (2D/3D, temporal, multi-channel) datasets within Matlab and Octave.

Topics

Details

License:
BSD-2-Clause
Tool Type:
desktop application
Programming Languages:
MATLAB
Added:
9/27/2021
Last Updated:
9/27/2021

Operations

Publications

Legland D, Devaux M. ImageM: a user-friendly interface for the processing of multi-dimensional images with Matlab. F1000Research. 2021;10:333. doi:10.12688/f1000research.51732.1.

Links