IMFLer

IMFLer performs interactive metabolic flux analysis and visualization to analyze flux distributions in genome-scale metabolic models.


Key Features:

  • Interactive Metabolic Flux Analysis: Supports flux balance analysis (FBA) and flux variability analysis (FVA) for comprehensive metabolic studies.
  • Escher Builder integration: Loads, displays, edits, and saves metabolic pathway maps via the Escher Builder.
  • Standardized Data Format: Uses a standardized file format for genome-scale metabolic models to improve data interoperability.
  • Flux Visualization: Visualizes flux distributions on metabolic pathway maps to support analysis of metabolic networks.

Scientific Applications:

  • Systems Biology: Conduct detailed analyses of metabolic networks by visualizing flux distributions.
  • Bioinformatics: Interpret complex data outputs from genome-scale metabolic models.
  • Metabolic Engineering: Facilitate exploration of metabolic pathways and their interactions within an organism.

Methodology:

Performs flux balance analysis (FBA) and flux variability analysis (FVA) and uses the Escher Builder to load, display, edit, and save metabolic pathway maps using a standardized file format for genome-scale metabolic models.

Topics

Details

License:
MIT
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
JavaScript
Added:
1/18/2022
Last Updated:
1/18/2022

Operations

Publications

Petrovs R, Stalidzans E, Pentjuss A. IMFLer: A Web Application for Interactive Metabolic Flux Analysis and Visualization. Journal of Computational Biology. 2021;28(10):1021-1032. doi:10.1089/cmb.2021.0056. PMID:34424732.

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