IMGT database of human MHC
IMGT database of human MHC provides a curated repository of Human Leukocyte Antigen (HLA) sequences to support immunogenetics research and clinical applications.
Key Features:
- Curated repository: Meticulously curated collection of HLA gene and allele sequences for research and clinical use.
- Regular updates: Periodic incorporation of new sequences and confirmatory data to maintain current HLA allele information.
- Standardized nomenclature: Sequence naming and allele designations follow the WHO Nomenclature Committee for Factors of the HLA System.
- Collaborative curation: Data curation and maintenance are performed in collaboration with the HLA Informatics Group and the European Bioinformatics Institute (EBI).
Scientific Applications:
- Immunogenetics research: Provides detailed genetic information on highly polymorphic HLA genes to support studies of immune system function and genetic variation.
- Clinical studies: Enables analyses of HLA variation related to disease susceptibility, organ transplantation compatibility, and personalized medicine.
- Quality control and standardization: Supplies standardized allele names and reference sequences to support reproducibility and comparability across studies.
Methodology:
Rigorous curation and validation of submitted HLA sequences with naming and verification according to WHO Nomenclature Committee for Factors of the HLA System guidelines.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 3/30/2017
- Last Updated:
- 4/16/2021
Operations
Publications
Robinson J, et al. The IMGT/HLA database. Nucleic Acids Res. 2011; 39:D1171-6. doi: 10.1093/nar/gkq998
PMID: 21071412