IMP
IMP provides organized genomic and transcriptomic omics data and integrated analysis resources for medicinal plants to support investigation of molecular metabolic and biosynthetic pathways underlying bioactive compounds with antitumor, anti-inflammatory, and antioxidant properties.
Key Features:
- Extensive Genomic Database: Curates 8,565,672 genes from 84 high-quality genome assemblies.
- Transcriptome Sequencing Samples: Integrates 2,156 transcriptome sequencing samples covering diverse organs, tissues, developmental stages, and stimulations.
- Integrated Analysis Modules: Provides ten integrated analysis modules for examination of gene annotations, sequences, functions, distributions, and expression.
Scientific Applications:
- Molecular Metabolic Pathway Exploration: Enables in-depth study of molecular metabolic pathways in medicinal plants using gene annotations and expression data.
- Synthetic Biology: Supplies genetic and functional information to support engineering or reconstruction of biosynthetic pathways in medicinal plants.
- Drug Discovery and Production: Facilitates identification and characterization of genes and pathways for discovery and production of natural bioactive compounds.
Methodology:
Curates genomic data and integrates 2,156 transcriptome sequencing samples and implements ten integrated analysis modules for gene annotation, sequence analysis, functional annotation, distribution analysis, and expression analysis.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 3/27/2024
- Last Updated:
- 11/24/2024
Operations
Publications
Chen T, Yang M, Cui G, Tang J, Shen Y, Liu J, Yuan Y, Guo J, Huang L. IMP: bridging the gap for medicinal plant genomics. Nucleic Acids Research. 2023;52(D1):D1347-D1354. doi:10.1093/nar/gkad898. PMID:37870445. PMCID:PMC10767881.