Infomap

Infomap identifies modules in complex networks by applying the Map Equation to detect flow-based modularity in ecological networks and other complex systems.


Key Features:

  • Map Equation framework: Implements the Map Equation information-theoretic framework to optimize modular partitions.
  • Flow-based modularity detection: Detects modules based on network flows such as biomass transfers in food webs and disease transmission pathways.
  • Network type support: Handles directed, weighted, and multilayer networks.
  • Information-theoretic compression–pattern duality: Exploits the relationship between data compression and pattern detection to uncover significant network patterns.

Scientific Applications:

  • Ecological network analysis: Identifies modular structures to inform understanding of ecological and evolutionary processes and network stability.
  • Food webs and disease transmission: Maps biomass transfers in food webs and traces disease transmission pathways through modular organization.
  • Cross-disciplinary complex systems: Applies to other biological disciplines and non-biological complex systems for detecting dynamic modular structures.

Methodology:

Optimizes the Map Equation using information-theoretic principles that balance data compression and pattern detection, applied to directed, weighted, and multilayer networks.

Topics

Details

Tool Type:
api, command-line tool
Programming Languages:
R
Added:
1/18/2021
Last Updated:
2/5/2021

Operations

Publications

Farage C, Edler D, Eklöf A, Rosvall M, Pilosof S. Identifying flow modules in ecological networks using Infomap. Unknown Journal. 2020. doi:10.1101/2020.04.14.040519.

Links