infoseq
infoseq reports descriptive information about biological sequences to support molecular biology, genomic, and proteomic analyses.
Key Features:
- Integration with EMBOSS: Integrated into the European Molecular Biology Open Software Suite (EMBOSS) to leverage its bioinformatics framework.
- ACD-based configuration: Supports Application Configuration Description (ACD) files for configuring and customizing applications within the EMBOSS framework.
- Developer APIs and libraries: Utilizes EMBOSS APIs and C programming libraries for application development and integration with third-party tools.
Scientific Applications:
- Molecular biology research: Provides essential sequence information for analyses in molecular biology.
- Genomic studies: Supplies descriptive sequence data relevant to genome analyses.
- Proteomic studies: Supplies sequence information useful for protein and proteome analyses.
Methodology:
Leverages EMBOSS C programming libraries and EMBOSS APIs and supports Application Configuration Description (ACD) files for application configuration and development.
Topics
Collections
Details
- License:
- GPL-3.0
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- C
- Added:
- 11/8/2015
- Last Updated:
- 12/10/2018
Operations
Publications
Bleasby AJ, Ison JC, Rice PM. EMBOSS Administrator's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151399.
Ison JC, Rice PM, Bleasby AJ. EMBOSS Developer's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151405.
Rice P, Longden I, Bleasby A. EMBOSS: The European Molecular Biology Open Software Suite. Trends in Genetics. 2000;16(6):276-277. doi:10.1016/s0168-9525(00)02024-2.
Documentation
Terms of use
http://emboss.open-bio.org/html/dev/ch01s01.htmlCitation instructions
http://emboss.open-bio.org/html/use/pr02s04.html