infoseq

infoseq reports descriptive information about biological sequences to support molecular biology, genomic, and proteomic analyses.


Key Features:

  • Integration with EMBOSS: Integrated into the European Molecular Biology Open Software Suite (EMBOSS) to leverage its bioinformatics framework.
  • ACD-based configuration: Supports Application Configuration Description (ACD) files for configuring and customizing applications within the EMBOSS framework.
  • Developer APIs and libraries: Utilizes EMBOSS APIs and C programming libraries for application development and integration with third-party tools.

Scientific Applications:

  • Molecular biology research: Provides essential sequence information for analyses in molecular biology.
  • Genomic studies: Supplies descriptive sequence data relevant to genome analyses.
  • Proteomic studies: Supplies sequence information useful for protein and proteome analyses.

Methodology:

Leverages EMBOSS C programming libraries and EMBOSS APIs and supports Application Configuration Description (ACD) files for application configuration and development.

Topics

Collections

Details

License:
GPL-3.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Linux, Windows, Mac
Programming Languages:
C
Added:
11/8/2015
Last Updated:
12/10/2018

Operations

Publications

Bleasby AJ, Ison JC, Rice PM. EMBOSS Administrator's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151399.

Ison JC, Rice PM, Bleasby AJ. EMBOSS Developer's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151405.

Rice P, Longden I, Bleasby A. EMBOSS: The European Molecular Biology Open Software Suite. Trends in Genetics. 2000;16(6):276-277. doi:10.1016/s0168-9525(00)02024-2.

Documentation

Downloads

Links