interferENZY

interferENZY validates enzymatic assay data and provides standardized kinetic analysis to detect assay interferences and enable bias-free estimation of kinetic parameters.


Key Features:

  • Quality Control: Validates enzymatic assay data and identifies potential interferences that may affect assay outcomes.
  • Automated Identification of Assay Interferences: Automatically detects both minor and major interferences within assay progress-curve data.
  • Bias-Free Estimation of Kinetic Parameters: Uses graphical representations of progress curves in modified reaction coordinates to estimate kinetic parameters without bias.
  • Computational Backend: Performs analyses using GNU Octave and retains submitted datasets only during analysis, deleting them after output generation.

Scientific Applications:

  • Enzyme Kinetics Characterization: Derives kinetic parameters from progress-curve data for quantitative characterization of enzymatic activity.
  • Allosteric and Modulation Studies: Detects and helps interpret effects of allosteric regulation and enzyme modulators on reaction kinetics.
  • Assay Validation for Reproducibility: Validates enzymatic assays to improve reliability and reproducibility of experimental molecular biology and biochemistry measurements.

Methodology:

Graphical representation of progress curves in modified reaction coordinates; automated detection of minor and major assay interferences; computations executed using GNU Octave.

Topics

Details

Tool Type:
api
Added:
1/18/2021
Last Updated:
2/5/2021

Operations

Publications

Pinto MF, Baici A, Pereira PJB, Macedo-Ribeiro S, Pastore A, Rocha F, Martins PM. interferENZY: A Web-Based Tool for Enzymatic Assay Validation and Standardized Kinetic Analysis. Journal of Molecular Biology. 2021;433(11):166613. doi:10.1016/j.jmb.2020.07.025. PMID:32768452.