iSnoDi-MDRF

iSnoDi-MDRF predicts potential associations between small nucleolar RNAs (snoRNAs) and diseases using a multiple data ranking framework.


Key Features:

  • Multiple Data Integration: Integrates diverse biological datasets within a multiple data ranking framework to enhance detection of snoRNA-disease associations.
  • Known and Novel Association Identification: Identifies both experimentally validated (known) and candidate (novel) snoRNA-disease associations.
  • Gene-Disease Association Utilization: Incorporates existing gene-disease association data to train the ranking model and improve predictive accuracy.

Scientific Applications:

  • Disease mechanism analysis: Prioritizes snoRNAs for investigating their roles in disease pathology.
  • Hypothesis generation and validation: Provides candidate snoRNA-disease links to guide experimental follow-up and development of therapeutic strategies.

Methodology:

Uses a multiple data ranking framework that processes diverse biological datasets and trains a predictive model using known gene-disease associations to predict snoRNA-disease links.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
9/25/2023
Last Updated:
11/24/2024

Operations

Data Inputs & Outputs

Aggregation

Outputs

    Publications

    Zhang W, Liu B. iSnoDi-MDRF: Identifying snoRNA-Disease Associations Based on Multiple Biological Data by Ranking Framework. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 2023;20(5):3013-3019. doi:10.1109/tcbb.2023.3258448. PMID:37030816.

    PMID: 37030816
    Funding: - National Natural Science Foundation of China: 62250028, 62271049, U22A2039