JBrowseR

JBrowseR integrates JBrowse 2 into R to enable interactive genome visualization and customization for genomic data analysis.

Key Features:

• R-based configuration: Configure and customize JBrowse 2 programmatically using R code.
• Integration with R frameworks: Embed and deploy JBrowse 2 sessions within Shiny applications and R Markdown documents.

Scientific Applications:

• Genomic data visualization: Provide interactive visualization of diverse genomic data modalities using JBrowse 2 within R.
• Integration in analysis workflows: Incorporate customized genome browser views into R-based data analysis and reporting workflows.

Methodology:

Configure and customize JBrowse 2 through R code to produce tailored genomic visualizations that can be embedded in Shiny applications or R Markdown and integrated into R analysis workflows.