JCS
JCS performs joint classification and segmentation of chest CT images to diagnose COVID-19 and localize pulmonary opacifications.
Key Features:
- Real-time Diagnosis: Reduces per-case processing time for chest CT scans relative to traditional methods, with an approximate reported processing time of 21.5 minutes.
- Explainability: Produces explainable outputs that provide insights into the model's decision-making process.
- High Sensitivity and Specificity: Achieves an average sensitivity of 95.0% and specificity of 93.0% for COVID-19 classification.
- Accurate Segmentation: Attains a Dice score of 78.5% for segmentation of opacifications in lung parenchyma.
Scientific Applications:
- Complementary diagnostic to RT-PCR: Serves as a complementary modality to Reverse Transcription Polymerase Chain Reaction (RT-PCR) by detecting COVID-19-related findings on chest CT scans.
- Early-stage detection: Supports identification of early-stage COVID-19 patients through detection and delineation of pulmonary opacifications on chest CT.
Methodology:
Developed using the COVID-CS dataset of 144,167 chest CT images from 400 COVID-19 patients and 350 uninfected cases, with 3,855 images from 200 patients annotated with fine-grained pixel-level opacification labels plus lesion counts, areas, and locations, and implemented via a joint classification and segmentation approach on chest CT images.
Topics
Collections
Details
- Tool Type:
- command-line tool
- Added:
- 3/19/2021
- Last Updated:
- 4/5/2021
Operations
Publications
Wu Y, Gao S, Mei J, Xu J, Fan D, Zhang R, Cheng M. JCS: An Explainable COVID-19 Diagnosis System by Joint Classification and Segmentation. IEEE Transactions on Image Processing. 2021;30:3113-3126. doi:10.1109/tip.2021.3058783. PMID:33600316.