JCS

JCS performs joint classification and segmentation of chest CT images to diagnose COVID-19 and localize pulmonary opacifications.


Key Features:

  • Real-time Diagnosis: Reduces per-case processing time for chest CT scans relative to traditional methods, with an approximate reported processing time of 21.5 minutes.
  • Explainability: Produces explainable outputs that provide insights into the model's decision-making process.
  • High Sensitivity and Specificity: Achieves an average sensitivity of 95.0% and specificity of 93.0% for COVID-19 classification.
  • Accurate Segmentation: Attains a Dice score of 78.5% for segmentation of opacifications in lung parenchyma.

Scientific Applications:

  • Complementary diagnostic to RT-PCR: Serves as a complementary modality to Reverse Transcription Polymerase Chain Reaction (RT-PCR) by detecting COVID-19-related findings on chest CT scans.
  • Early-stage detection: Supports identification of early-stage COVID-19 patients through detection and delineation of pulmonary opacifications on chest CT.

Methodology:

Developed using the COVID-CS dataset of 144,167 chest CT images from 400 COVID-19 patients and 350 uninfected cases, with 3,855 images from 200 patients annotated with fine-grained pixel-level opacification labels plus lesion counts, areas, and locations, and implemented via a joint classification and segmentation approach on chest CT images.

Topics

Collections

Details

Tool Type:
command-line tool
Added:
3/19/2021
Last Updated:
4/5/2021

Operations

Publications

Wu Y, Gao S, Mei J, Xu J, Fan D, Zhang R, Cheng M. JCS: An Explainable COVID-19 Diagnosis System by Joint Classification and Segmentation. IEEE Transactions on Image Processing. 2021;30:3113-3126. doi:10.1109/tip.2021.3058783. PMID:33600316.

PMID: 33600316
Funding: - Major Project for New Generation of AI: 2018AAA0100400 - NSFC: 61922046, 62002176 - Tianjin Natural Science Foundation: 17JCJQJC43700, 18ZXZNGX00110