JeasyTFM
JeasyTFM analyzes traction force microscopy (TFM) time-lapse images to quantify cellular traction forces and enable large-scale, multi-position and multi-color measurements of cell–extracellular matrix mechanics.
Key Features:
- ImageJ plugin: Implemented as a plugin for ImageJ to integrate with ImageJ image-processing functions for TFM data.
- Large-scale TFM dataset analysis: Supports analysis of large-scale traction force microscopy datasets for high-throughput experiments.
- Time-lapse image processing: Processes time-lapse images captured during TFM experiments to extract temporal force information.
- Multi-color and multi-position analysis: Supports multi-color and multi-position time-lapse images to analyze different cellular components or spatially resolved conditions simultaneously.
- Automatic data processing: Automates data processing workflows to compute traction forces from image datasets.
Scientific Applications:
- Cell mechanics: Quantifies tensile forces exerted by adherent cells on their substrates for studies of cellular mechanics.
- Mechanobiology: Enables investigation of how cells sense and respond to mechanical cues in the extracellular matrix.
- Tissue engineering: Provides force measurements relevant to designing and evaluating engineered extracellular matrices and constructs.
- Cancer research: Facilitates analysis of cell–matrix interactions and force generation in cancer-related studies.
Methodology:
Processes time-lapse images from TFM experiments and analyzes them to quantify forces exerted by adherent cells on their substrates; handles multi-color imaging for simultaneous analysis of different cellular components or conditions and multi-position imaging for spatially resolved force measurements; automates processing of large datasets.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- library
- Added:
- 4/30/2024
- Last Updated:
- 4/30/2024
Operations
Publications
Carl P, Rondé P. JEasyTFM: an open-source software package for the analysis of large 2D TFM data within ImageJ. Bioinformatics Advances. 2023;3(1). doi:10.1093/bioadv/vbad156. PMID:37928344. PMCID:PMC10625472.