JSONWP
JSONWP generates static websites from JSON using a JavaScript/React application to present protein bioinformatics datasets and visualizations.
Key Features:
- Static website generation: Converts structured JSON data into static website pages for presenting bioinformatics content.
- JSON input format: Uses JavaScript Object Notation (JSON) as the primary data input format for representing bioinformatics datasets.
- React-based rendering: Implements a JavaScript application built with React to render pages and visualization components from JSON.
- Integration with bioinformatics visualization components: Incorporates publicly available bioinformatics visualization components to present protein structures and interactions.
- Protein-focused presentation: Targets presentation of protein studies and related bioinformatics data.
Scientific Applications:
- Presentation of protein bioinformatics research: Transforms JSON representations into web pages to communicate findings in protein studies.
- Visualization of protein structures and interactions: Enables embedding of visualization components to display protein structural data and molecular interactions.
- Standardization and reproducibility: Provides a JSON-driven format for consistent representation of visualizations across studies.
Methodology:
Converts structured JSON data into static website pages using a JavaScript application built with React, dynamically rendering embedded bioinformatics visualization components from the JSON input.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- JavaScript
- Added:
- 4/30/2024
- Last Updated:
- 4/30/2024
Operations
Data Inputs & Outputs
Data retrieval
Publications
Kilinc M, Jia K, Jernigan RL. JSONWP: a static website generator for protein bioinformatics research. Bioinformatics Advances. 2023;3(1). doi:10.1093/bioadv/vbad154. PMID:37904893. PMCID:PMC10613403.