JSONWP

JSONWP generates static websites from JSON using a JavaScript/React application to present protein bioinformatics datasets and visualizations.


Key Features:

  • Static website generation: Converts structured JSON data into static website pages for presenting bioinformatics content.
  • JSON input format: Uses JavaScript Object Notation (JSON) as the primary data input format for representing bioinformatics datasets.
  • React-based rendering: Implements a JavaScript application built with React to render pages and visualization components from JSON.
  • Integration with bioinformatics visualization components: Incorporates publicly available bioinformatics visualization components to present protein structures and interactions.
  • Protein-focused presentation: Targets presentation of protein studies and related bioinformatics data.

Scientific Applications:

  • Presentation of protein bioinformatics research: Transforms JSON representations into web pages to communicate findings in protein studies.
  • Visualization of protein structures and interactions: Enables embedding of visualization components to display protein structural data and molecular interactions.
  • Standardization and reproducibility: Provides a JSON-driven format for consistent representation of visualizations across studies.

Methodology:

Converts structured JSON data into static website pages using a JavaScript application built with React, dynamically rendering embedded bioinformatics visualization components from the JSON input.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
JavaScript
Added:
4/30/2024
Last Updated:
4/30/2024

Operations

Data Inputs & Outputs

Data retrieval

Publications

Kilinc M, Jia K, Jernigan RL. JSONWP: a static website generator for protein bioinformatics research. Bioinformatics Advances. 2023;3(1). doi:10.1093/bioadv/vbad154. PMID:37904893. PMCID:PMC10613403.

PMID: 37904893
Funding: - NIH: R01GM127701, R01HG012117

Links