KairoSight
KairoSight analyzes cardiac optical mapping (optocardiography) data to quantify transmembrane voltage and intracellular calcium dynamics from parameter-sensitive fluorescence dye signals for cardiac electrophysiology studies.
Key Features:
- Optocardiography signal analysis: Performs quantitative analysis of voltage and intracellular calcium signals derived from parameter-sensitive fluorescence dyes.
- Comprehensive electrical and calcium dynamics quantification: Extracts and measures electrical activity and calcium transients to characterize cardiac electrophysiological properties.
- Large dataset handling: Processes large optical mapping datasets to enable detailed spatial and temporal analyses.
- Multispecies experimental support: Demonstrated with datasets from Langendorff-perfused rat, guinea pig, and swine hearts and human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CM).
- Fluorescence dye compatibility: Supports common voltage and calcium indicators including RH237, Rhod-2 AM, FluoVolt, and Fluo-4 AM.
Scientific Applications:
- Pharmacological response analysis: Enables assessment of cardiac responses to agents such as ryanodine and isoproterenol by analyzing changes in voltage and calcium signals.
- Regional electrophysiology and injury studies: Facilitates investigation of spatial heterogeneity and regional differences in tissue properties following ablation injuries.
- Comparative and translational studies: Supports cross-species and model comparisons, including Langendorff-perfused hearts and hiPSC-CM, for translational cardiac research.
Methodology:
Implemented in Python and processes optical mapping fluorescence datasets to extract and quantify transmembrane voltage and intracellular calcium signals.
Topics
Details
- License:
- GPL-3.0
- Cost:
- Free of charge
- Tool Type:
- library
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 4/26/2022
- Last Updated:
- 4/26/2022
Operations
Publications
Cooper BL, Gloschat C, Swift LM, Prudencio T, McCullough D, Jaimes R, Posnack NG. KairoSight: Open-Source Software for the Analysis of Cardiac Optical Data Collected From Multiple Species. Frontiers in Physiology. 2021;12. doi:10.3389/fphys.2021.752940. PMID:34777017. PMCID:PMC8586513.