kuenm

The kuenm R package is a comprehensive set of tools to streamline and enhance ecological niche modeling using the Maxent platform. It provides a rigorous, reproducible approach to model calibration, selection, evaluation, and extrapolation risk analysis.

Key features of the kuenm package include:

1. Detailed model calibration: The package lets users fine-tune model parameters and select the best settings based on statistical significance, predictive power, and model complexity.

2. Final model creation: kuenm simplifies the process of creating final models by allowing multiple parameter sets and model transfers, reducing the time and effort required for these tasks.

3. Model evaluation: The package provides tools for assessing the performance and validity of the final models.

4. Extrapolation risk analysis: kuenm incorporates the mobility-oriented parity (MOP) metric, allowing users to evaluate the risks associated with extrapolating models to different scenarios and preventing overinterpreting model outcomes.

Topic

Ecology;Molecular interactions, pathways and networks

Detail

  • Operation: -

  • Software interface: Library

  • Language: R

  • License: GNU General Public License, version 2

  • Cost: Free of charge with restrictions

  • Version name: 1.1.3

  • Credit: PAPIIT UNAM and CONACyT-FORDECyT.

  • Input: -

  • Output: -

  • Contact: Marlon E. Cobos manubio13@gmail.com

  • Collection: -

  • Maturity: Stable

Publications

  • kuenm: an R package for detailed development of ecological niche models using Maxent.
  • Cobos ME, et al. kuenm: an R package for detailed development of ecological niche models using Maxent. kuenm: an R package for detailed development of ecological niche models using Maxent. 2019; 7:e6281. doi: 10.7717/peerj.6281
  • https://doi.org/10.7717/peerj.6281
  • PMID: 30755826
  • PMC: PMC6368831

Download and documentation


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