L-Measure

L-Measure quantifies neuronal morphology by computing comprehensive neuroanatomical parameters from 3D digital reconstructions to support morphometric analysis.


Key Features:

  • Quantitative Morphological Analysis: Computes a comprehensive array of neuroanatomical parameters from 3D digital reconstruction files.
  • Basic Morphological Parameters Extraction: Extracts fundamental morphological parameters from neuronal reconstructions.
  • Frequency Distributions Computation: Computes frequency distributions for morphometric data.
  • Subregion Measurements: Measures specified subregions within neuronal arbors.
  • Statistical Comparisons: Performs statistical comparisons between two groups of cells.
  • Filtered Selections and Searches: Selects and searches collections of neurons using any Boolean combination of available morphometric measures.
  • Input Compatibility: Accepts 3D digital reconstruction files from applications such as Neurolucida, Eutectic, and Neuron_Morpho and outputs from computational simulations.
  • Performance: Executes analyses rapidly, typically processing approximately 20 neurons within minutes.

Scientific Applications:

  • Structure–function analysis: Enables detailed morphological analyses to investigate neuronal structure–function relationships.
  • Anatomical characterization: Supports basic anatomical characterization of individual neurons and neuronal arbors.
  • Comparative morphometrics: Facilitates comparative analyses across different experimental conditions or cell types.

Methodology:

Processes 3D digital reconstruction files obtained through brightfield or fluorescence microscopy using applications such as Neurolucida, Eutectic, or Neuron_Morpho, and accommodates computational simulations.

Topics

Details

Tool Type:
desktop application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Java
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

Scorcioni R, Polavaram S, Ascoli GA. L-Measure: a web-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies. Nature Protocols. 2008;3(5):866-876. doi:10.1038/nprot.2008.51. PMID:18451794. PMCID:PMC4340709.

Documentation

Links