L-Measure
L-Measure quantifies neuronal morphology by computing comprehensive neuroanatomical parameters from 3D digital reconstructions to support morphometric analysis.
Key Features:
- Quantitative Morphological Analysis: Computes a comprehensive array of neuroanatomical parameters from 3D digital reconstruction files.
- Basic Morphological Parameters Extraction: Extracts fundamental morphological parameters from neuronal reconstructions.
- Frequency Distributions Computation: Computes frequency distributions for morphometric data.
- Subregion Measurements: Measures specified subregions within neuronal arbors.
- Statistical Comparisons: Performs statistical comparisons between two groups of cells.
- Filtered Selections and Searches: Selects and searches collections of neurons using any Boolean combination of available morphometric measures.
- Input Compatibility: Accepts 3D digital reconstruction files from applications such as Neurolucida, Eutectic, and Neuron_Morpho and outputs from computational simulations.
- Performance: Executes analyses rapidly, typically processing approximately 20 neurons within minutes.
Scientific Applications:
- Structure–function analysis: Enables detailed morphological analyses to investigate neuronal structure–function relationships.
- Anatomical characterization: Supports basic anatomical characterization of individual neurons and neuronal arbors.
- Comparative morphometrics: Facilitates comparative analyses across different experimental conditions or cell types.
Methodology:
Processes 3D digital reconstruction files obtained through brightfield or fluorescence microscopy using applications such as Neurolucida, Eutectic, or Neuron_Morpho, and accommodates computational simulations.
Topics
Details
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Java
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Scorcioni R, Polavaram S, Ascoli GA. L-Measure: a web-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies. Nature Protocols. 2008;3(5):866-876. doi:10.1038/nprot.2008.51. PMID:18451794. PMCID:PMC4340709.