LadderFinder
Designed to solve a problem in DNA genotyping. It helps in the construction of allelic ladders that drive the sizing and binning of SSR fragments produced by PCR. The algorithm scans a spreadsheet containing a database of individual profiles and finds a minimum set of individuals, that covers the maximum number of alleles represented in the database, with all alleles represented only once.
Topics
Details
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Java, C++
- Added:
- 12/18/2017
- Last Updated:
- 12/10/2018
Operations
Data Inputs & Outputs
Genotyping
Other operations do not define inputs or outputs.