lcc
lcc estimates longitudinal concordance correlation, longitudinal Pearson correlation (LPC), and longitudinal accuracy (LA) to assess agreement between measurement methods or raters over time in longitudinal studies.
Key Features:
- Longitudinal Concordance Correlation (LCC): Estimates the LCC to evaluate agreement profiles of quantitative measurements across time.
- Longitudinal Pearson Correlation and Accuracy (LPC, LA): Estimates LPC and LA as complementary measures of association and accuracy over time.
- Polynomial Mixed-effects Regression: Employs polynomial mixed-effects regression models using fixed effects and variance components to model longitudinal trends.
- Variance-covariance Modeling: Handles variance-covariance matrices for random effects and residuals and supports different within-group error structures.
- Covariate Adjustment: Allows inclusion of covariates in the linear predictor to control systematic variations in responses.
- Study Design Flexibility: Accommodates balanced and unbalanced experimental and observational study designs.
- Bootstrap Confidence Intervals: Provides bootstrap-based confidence intervals for inference.
- Diagnostic Outputs: Produces diagnostic plots and statistical tests with numerical and graphical summaries.
Scientific Applications:
- Comparative Method Evaluation: Quantifies agreement and consistency between different measurement methods or raters over time.
- Longitudinal Agreement Analysis in Medicine, Pharmacology, and Agronomy: Assesses temporal agreement of quantitative measurements in longitudinal studies within these fields.
Methodology:
Estimation via polynomial mixed-effects regression models with fixed effects and variance components; modeling of variance-covariance matrices for random effects and residuals; inclusion of covariates in the linear predictor; inference using bootstrap confidence intervals; diagnostics via plots and statistical tests.
Topics
Details
- License:
- GPL-2.0
- Tool Type:
- api, command-line tool
- Programming Languages:
- R
- Added:
- 1/18/2021
- Last Updated:
- 2/12/2021
Operations
Publications
Oliveira TP, Moral RA, Zocchi SS, Demetrio CG, Hinde J. lcc: an R package to estimate the concordance correlation, Pearson correlation and accuracy over time. PeerJ. 2020;8:e9850. doi:10.7717/peerj.9850. PMID:32995081. PMCID:PMC7502249.