lcc

lcc estimates longitudinal concordance correlation, longitudinal Pearson correlation (LPC), and longitudinal accuracy (LA) to assess agreement between measurement methods or raters over time in longitudinal studies.


Key Features:

  • Longitudinal Concordance Correlation (LCC): Estimates the LCC to evaluate agreement profiles of quantitative measurements across time.
  • Longitudinal Pearson Correlation and Accuracy (LPC, LA): Estimates LPC and LA as complementary measures of association and accuracy over time.
  • Polynomial Mixed-effects Regression: Employs polynomial mixed-effects regression models using fixed effects and variance components to model longitudinal trends.
  • Variance-covariance Modeling: Handles variance-covariance matrices for random effects and residuals and supports different within-group error structures.
  • Covariate Adjustment: Allows inclusion of covariates in the linear predictor to control systematic variations in responses.
  • Study Design Flexibility: Accommodates balanced and unbalanced experimental and observational study designs.
  • Bootstrap Confidence Intervals: Provides bootstrap-based confidence intervals for inference.
  • Diagnostic Outputs: Produces diagnostic plots and statistical tests with numerical and graphical summaries.

Scientific Applications:

  • Comparative Method Evaluation: Quantifies agreement and consistency between different measurement methods or raters over time.
  • Longitudinal Agreement Analysis in Medicine, Pharmacology, and Agronomy: Assesses temporal agreement of quantitative measurements in longitudinal studies within these fields.

Methodology:

Estimation via polynomial mixed-effects regression models with fixed effects and variance components; modeling of variance-covariance matrices for random effects and residuals; inclusion of covariates in the linear predictor; inference using bootstrap confidence intervals; diagnostics via plots and statistical tests.

Topics

Details

License:
GPL-2.0
Tool Type:
api, command-line tool
Programming Languages:
R
Added:
1/18/2021
Last Updated:
2/12/2021

Operations

Publications

Oliveira TP, Moral RA, Zocchi SS, Demetrio CG, Hinde J. lcc: an R package to estimate the concordance correlation, Pearson correlation and accuracy over time. PeerJ. 2020;8:e9850. doi:10.7717/peerj.9850. PMID:32995081. PMCID:PMC7502249.

PMID: 32995081
PMCID: PMC7502249
Funding: - Science Foundation Ireland: SFI/12/RC/2289

Links