LCMS TNO DECO
LCMS TNO DECO preprocesses high-resolution LC/HRMS data by selecting informative mass-over-charge (m/z) channels to improve deconvoluted mass spectra for downstream quantification and identification.
Key Features:
- Informative m/z Channel Selection: Uses a metric derived from errors in isotopic distribution patterns and the quality of signals within predefined mass chromatogram blocks to pre-select informative m/z channels.
- Data Clean-Up: Maintains intensity counts from m/z channels associated with molecular ions, adducts, 13C-isotopes, and multiply charged ions while eliminating non-informative m/z channels.
- Automatic Processing: Automates removal of irrelevant m/z channels from deconvoluted mass spectra as an alternative to peak picking and de-isotoping without discarding valuable information.
Scientific Applications:
- Quantification and Identification: Enhances downstream compound quantification and identification in complex samples by retaining informative m/z channels.
- Data Integrity: Improves accuracy and reliability of mass spectra by removing non-informative m/z channels while preserving signal components relevant to analytes.
Methodology:
Evaluates isotopic distribution patterns and signal quality within specific mass chromatogram blocks to inform selection of informative m/z channels for cleaning deconvoluted mass spectra.
Topics
Collections
Details
- Tool Type:
- command-line tool
- Added:
- 12/1/2015
- Last Updated:
- 11/25/2024
Operations
Publications
Krishnan S, Verheij EER, Bas RC, Hendriks MWB, Hankemeier T, Thissen U, Coulier L. Pre‐processing liquid chromatography/high‐resolution mass spectrometry data: extracting pure mass spectra by deconvolution from the invariance of isotopic distribution. Rapid Communications in Mass Spectrometry. 2013;27(9):917-923. doi:10.1002/rcm.6517. PMID:23592192.