LifeWatchGreece MicroCT vLab

LifeWatchGreece MicroCT vLab provides high-resolution X-ray micro-CT imaging and three-dimensional reconstruction of biological specimens for non-destructive morphological characterization and quantitative comparative analyses.


Key Features:

  • Non-Destructive 3D Imaging: Generates accurate 3D reconstructions from series of X-ray projection images while preserving specimens, enabling internal and external morphological study.
  • Sub-micron Resolution: Acquires micro-CT data at sub-micron resolution to resolve fine internal structures.
  • Virtual Micro-CT Laboratory (Micro-CT_vlab): Provides a computational environment for handling large micro-CT datasets and for visualization and manipulation of 3D datasets.
  • Interactive 3D Analysis: Enables virtual dissection and supports qualitative and quantitative analyses of 3D models.

Scientific Applications:

  • Functional Morphology: Supports analysis of form-function relationships using detailed internal and external 3D morphology from micro-CT scans.
  • Taxonomy: Aids species identification and morphological character description through precise 3D morphological datasets.
  • Evolutionary Biology: Facilitates comparative morphological studies across taxa to investigate evolutionary changes and adaptations.
  • Developmental Research: Enables non-destructive observation of internal developmental stages and growth patterns in specimens.

Methodology:

Captures series of X-ray projection images using micro-CT and processes them into high-resolution three-dimensional models.

Topics

Collections

Details

License:
CC-BY-4.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
PHP
Added:
9/1/2017
Last Updated:
1/13/2019

Operations

Publications

Keklikoglou K, Faulwetter S, Chatzinikolaou E, Michalakis N, Filiopoulou I, Minadakis N, Panteri E, Perantinos G, Gougousis A, Arvanitidis C. Micro-CTvlab: A web based virtual gallery of biological specimens using X-ray microtomography (micro-CT). Biodiversity Data Journal. 2016;4. doi:10.3897/bdj.4.e8740. PMID:27956848. PMCID:PMC5139143.

Documentation

User manual
https://microct.portal.lifewatchgreece.eu/node/34
The LifeWatchGreece MicroCT vLab Help Page

Links

Other
https://microct.portal.lifewatchgreece.eu/
(The LifeWatchGreece MicroCT Portal)
Other
https://www.lifewatchgreece.eu/?q=content/microct-services
(The description of the MicroCT vLab in the LifeWatchGreece Portal)