LigAdvisor
LigAdvisor integrates public chemical, biological, and clinical databases with computational similarity estimation to support drug repurposing and polypharmacology analyses.
Key Features:
- Integration of Public Databases: Aggregates data from DrugBank, Protein Data Bank (PDB), UniProt, Clinical Trials, and Therapeutic Target Database for combined chemical, biological, and clinical information.
- Polypharmacology and Drug Repurposing Support: Supports rational design of multi-target ligands and repositioning of known drugs using integrated datasets and similarity estimation.
- Efficient Data Mining: Enables mining of publicly available datasets using computational tools and data-driven methodologies to reveal repurposing and polypharmacology opportunities.
- Customizable Ligand- and Target-based Searches: Performs ligand- and target-based searches tailored to specific molecules for focused analyses.
- Integration with Clinical Data: Facilitates integration of similarity estimation results with Clinical Trials data to inform therapeutic assessment.
- Target Fishing and Profiling: Supports target fishing and profiling analyses for small molecules.
Scientific Applications:
- Drug Repurposing: Enables identification and prioritization of existing drugs for new therapeutic indications via similarity estimation and integrated datasets.
- Polypharmacology Research: Assists design and evaluation of multi-target ligands by combining chemical and target information.
- Target Identification and Profiling: Supports target fishing, target identification, and profiling of small molecules.
- Clinical Evidence Integration: Links similarity results with Clinical Trials data to support interpretation of clinical relevance.
Methodology:
Integrates DrugBank, Protein Data Bank (PDB), UniProt, Clinical Trials, and Therapeutic Target Database and applies computational similarity estimation, ligand- and target-based searches, and data mining.
Topics
Details
- Tool Type:
- web application
- Added:
- 10/4/2021
- Last Updated:
- 11/24/2024
Operations
Publications
Pinzi L, Tinivella A, Gagliardelli L, Beneventano D, Rastelli G. LigAdvisor: a versatile and user-friendly web-platform for drug design. Nucleic Acids Research. 2021;49(W1):W326-W335. doi:10.1093/nar/gkab385. PMID:34023895. PMCID:PMC8262749.
DOI: 10.1093/nar/gkab385
PMID: 34023895
PMCID: PMC8262749
Funding: - Fondo di Ateneo per la Ricerca: 166835
Documentation
Training material
https://ligadvisor.unimore.it/tutorial