LimeTr

LimeTr implements robust mixed-effects modeling by integrating trimming into the marginal likelihood to provide robust estimates for analyses with outliers, nonlinear observation models, explicit priors, and constrained dose-response relationships (e.g., monotonicity and concavity) in longitudinal analyses and meta-analyses.


Key Features:

  • Robust estimation with trimming: Incorporates trimming within the marginal likelihood of mixed-effects models to reduce the influence of outliers and improve reliability in longitudinal analyses and meta-analyses.
  • Nonlinear observation models and priors: Supports nonlinear measurement/observation models and explicit priors beyond linear random-effects approximations such as log-linear models.
  • Constraints on dose-response relationships: Allows imposition of constraints including monotonicity and concavity on dose-response functions.
  • Computational efficiency: Provides computational performance improvements relative to other robust alternatives for large-scale analyses.

Scientific Applications:

  • Meta-analysis: Produces more accurate pooled estimates in the presence of outliers.
  • Longitudinal studies: Handles complex repeated-measures structures and outlier robustness in longitudinal analyses.
  • Global health research: Enables constrained modeling of dose-response relationships relevant to health and epidemiological analyses.

Methodology:

Integrates trimming into the marginal likelihood of mixed-effects models and supports nonlinear observation models, explicit priors, and constraints such as monotonicity and concavity on dose-response relationships.

Topics

Details

License:
BSD-2-Clause
Tool Type:
command-line tool
Programming Languages:
Python, Fortran
Added:
1/18/2021
Last Updated:
2/16/2021

Operations

Publications

Zheng P, Barber R, Sorensen R, Murray C, Aravkin A. Trimmed Constrained Mixed Effects Models: Formulations and Algorithms. Unknown Journal. 2020. doi:10.1101/2020.01.28.923599.

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