Lion Localizer
Lion Localizer determines the geographic provenance of seized lion (Panthera leo) samples by comparing mitochondrial DNA (mtDNA) cytochrome b sequences to a curated reference database for conservation and forensic purposes.
Key Features:
- Comprehensive mtDNA database: Contains mitochondrial DNA sequences from lions sampled at 146 localities across Africa and India compiled from previously published studies.
- Sequence length support: Supports cytochrome b sequences of 350 base pairs (bp) or 1,140 bp derived from seized lion products.
- Match identification: Identifies exact or partial sequence matches between queried samples and database entries.
- Geospatial mapping of matches: Maps matched database localities onto a geographic representation of Africa to indicate potential sample provenance.
- Provenance tracing: Associates sequence matches with geographic localities to trace movement of trafficked items from origin toward transit or destination countries.
Scientific Applications:
- Forensic provenance assignment: Provides genetic evidence to assign geographic origin of confiscated lion body parts for wildlife crime investigations.
- Poaching source identification: Identifies potential source regions to inform spatial analyses of poaching patterns.
- Conservation planning: Informs targeted conservation actions and mitigation strategies by revealing geographic origins of impacted populations.
- Illegal trade network analysis: Supports tracing of trafficking routes by linking seized specimens to known sampling localities.
Methodology:
Cytochrome b mtDNA sequences (350 or 1,140 bp) obtained from seized lion products are compared against a curated reference database of lion mtDNA to identify exact or partial matches, and matched localities are mapped to indicate sample provenance.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 4/19/2024
- Last Updated:
- 11/24/2024
Operations
Publications
Au WC, Dures SG, Ishida Y, Green CE, Zhao K, Ogden R, Roca AL. Lion Localizer: A software tool for inferring the provenance of lions (<i>Panthera leo</i>) using mitochondrial DNA. Journal of Heredity. 2023;115(2):166-172. doi:10.1093/jhered/esad072. PMID:37952226.