LipidWrapper
LipidWrapper generates large-scale lipid bilayer models with biologically relevant curvature to represent subcellular membrane architectures for computational studies.
Key Features:
- Curved Membrane Modeling: Generates lipid membranes with varying geometries and biologically relevant curvature derived from experimental and theoretical sources.
- Large-Scale Model Construction: Constructs large-scale lipid bilayer models suitable for representing complex subcellular environments.
- Multi-Scale Modeling: Operates across multiple spatial scales to facilitate integration of different levels of membrane detail in simulations.
Scientific Applications:
- Subcellular Membrane Representation: Modeling precise membrane curvature to study structural and functional aspects of subcellular environments.
- Viral Mechanism Studies: Investigating how membrane curvature influences viral processes, including mechanisms of influenza virulence.
Methodology:
Integrates data from experimental and theoretical sources to construct lipid bilayer models with specified geometries and curvature.
Topics
Details
- Tool Type:
- desktop application, library
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Python
- Added:
- 5/21/2018
- Last Updated:
- 12/10/2018
Operations
Publications
Durrant JD, Amaro RE. LipidWrapper: An Algorithm for Generating Large-Scale Membrane Models of Arbitrary Geometry. PLoS Computational Biology. 2014;10(7):e1003720. doi:10.1371/journal.pcbi.1003720. PMID:25032790. PMCID:PMC4102414.