MaggotTracker
MaggotTracker performs automated, high-resolution single-animal tracking and quantitative analysis of Drosophila larval locomotion to characterize locomotor phenotypes.
Key Features:
- Automated Tracking: Uses a motorized microscope stage to maintain the subject within the viewing center during video capture for consistent single-animal tracking.
- Midline Representation: Reduces each larva into 13 evenly distributed points along its midline to represent body shape.
- Behavioral Parameter Quantification: Computes over 20 behavioral parameters from video-derived midline data.
- Locomotion Metrics Evaluated: Evaluates shape, peristalsis movement, stamina, and the track of the animal.
- Fixed-Duration Recording: Tracks each larva for four minutes during analysis.
Scientific Applications:
- Correlation Analysis: Identified correlations between distance traveled and striding speed and relationships among striding speed, stride distance, and stride duration.
- Sexual Dimorphism Studies: Observed sexual dimorphism in body length while locomotive parameters such as speed showed no significant sex differences.
- Developmental and Substrate Effects: Demonstrated that locomotive parameters are influenced by developmental stage and the surface on which larvae crawl.
- Genetic Mutant Analysis — Circadian Genes: Reported no significant changes in movement speed for period (per), timeout, and timeless (tim) mutants.
- Genetic Mutant Analysis — Neuromuscular Junction Genes: Detected significant alterations in multiple locomotive parameters for ether a go-go (eag), Shaker (Sh), slowpoke (slo), and dunce (dnc) mutants consistent with neuromuscular functions.
- K+ Channel Phenotypic Similarity: Found highly similar phenotypic patterns among the K+ channel genes eag, Sh, and slo.
Methodology:
Video capture with a motorized microscope stage to keep the larva centered; representation of each larva as 13 evenly distributed midline points; computation of over 20 locomotion-related parameters from four-minute recordings.
Topics
Details
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Java
- Added:
- 8/3/2017
- Last Updated:
- 12/10/2018
Operations
Data Inputs & Outputs
Analysis
Outputs
Publications
Aleman-Meza B, et al. An automated system for quantitative analysis of Drosophila larval locomotion. BMC Dev Biol. 2015; 15:11. doi: 10.1186/s12861-015-0062-0
PMID: 25881248
Documentation
General
http://wormloco.org/mag/doc/