Make2D-DB II
Make2D-DB II provides a federated framework for creating, converting, publishing, interconnecting, and maintaining two-dimensional gel electrophoresis (2D-PAGE) databases to support large-scale proteomic data integration.
Key Features:
- Database operations: Creation, conversion, publication, and maintenance of 2D-PAGE databases.
- Federated database environment: Provides a federated architecture for managing distributed 2D-PAGE datasets.
- Automatic data updates: Supports automatic updating of data linked to external resources.
- Dynamic interconnection: Enables dynamic linking of remote databases to form a unified virtual database.
Scientific Applications:
- Proteomics research: Management and integration of 2D-PAGE (2-DE) datasets for protein separation and analysis.
- Data integration: Integration of data from multiple 2D-PAGE sources to enhance comparative proteomic analyses.
- Collaborative research: Linking distributed 2D-PAGE databases to support cross-institutional proteomics studies.
Methodology:
Employs a federated database approach with dynamic interconnections between remote databases and mechanisms for automatic updates from external resources.
Topics
Collections
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Mac
- Programming Languages:
- Perl
- Added:
- 12/6/2017
- Last Updated:
- 8/28/2025
Operations
Publications
Mostaguir K, Hoogland C, Binz P, Appel RD. The Make 2D‐DB II package: Conversion of federated two‐dimensional gel electrophoresis databases into a relational format and interconnection of distributed databases. PROTEOMICS. 2003;3(8):1441-1444. doi:10.1002/pmic.200300483. PMID:12923769.
PMID: 12923769