Mammalian Gene Collection
Mammalian Gene Collection provides full-length complementary DNA (cDNA) sequences and clones for human and mouse genes to support genomic and functional studies.
Key Features:
- Full-length cDNA and ORF generation: Generates and verifies full-length cDNA sequences and complete open reading frames (ORFs) for human and mouse genes.
- Specialized libraries: Creates specialized libraries enriched for full-length cDNAs used as sources for expressed sequence tags (ESTs).
- EST generation and analysis: Produces expressed sequence tags (ESTs) from enriched libraries and analyzes them to identify candidate clones containing complete ORFs.
- High-accuracy sequencing: Performs high-accuracy sequencing of candidate clones to verify complete ORFs.
- Database and repository development: Develops databases and clone repositories and distributes sequences and clones through public databases and clone distribution networks.
- Scale and coverage: Has sequenced and verified full ORFs for over 9,000 human genes and more than 6,000 mouse genes, and identified candidate full-ORF clones for approximately 7,800 human and 3,500 mouse genes.
Scientific Applications:
- Genetics: Provides verified full-length gene sequences and clones to support genetic research.
- Molecular biology: Supplies full-length cDNA clones for experimental molecular biology studies.
- Bioinformatics: Offers reference sequences to support bioinformatics analyses and gene annotation.
- Basic and applied biomedical studies: Supports basic research and applied biomedical investigations into mammalian genomics and implications for health and disease.
Methodology:
Analyzes expressed sequence tags (ESTs) derived from libraries enriched for full-length cDNAs to identify candidate clones with complete open reading frames (ORFs) and develops databases for sequence and clone metadata.
Topics
Details
- License:
- Unlicense
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 3/30/2017
- Last Updated:
- 4/19/2021
Operations
Publications
Strausberg RL, Feingold EA, Klausner RD, Collins FS. The Mammalian Gene Collection. Science. 1999;286(5439):455-457. doi:10.1126/science.286.5439.455. PMID:10521335.
Unknown Authors. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences. 2002;99(26):16899-16903. doi:10.1073/pnas.242603899. PMID:12477932. PMCID:PMC139241.