MAPI

MAPI visualizes and enables integrative analysis of large-scale genomic datasets produced by next-generation sequencing (NGS) and array-based profiling methods.


Key Features:

  • High-Performance Visualization: Implements high-performance rendering to manage extensive, heterogeneous genomic datasets on standard desktop systems.
  • Integrative Data Support: Supports next-generation sequencing (NGS) and array-based profiling data and the integration of clinical and phenotypic information.
  • Flexible Data Loading: Allows loading and visualization of both local and remote datasets.
  • Modular Architecture: Employs a modular design to adapt to various research scenarios.

Scientific Applications:

  • Exploratory Genomic Analysis: Facilitates inspection and exploration of NGS and array-based genomic datasets.
  • Integrative Clinical-Genomic Studies: Enables combining genetic data with clinical and phenotypic information for integrative analyses.
  • Multidimensional Genomics Research: Supports studies that require visualization of diverse genomic data types for multi-dimensional analysis.

Methodology:

Implements high-performance rendering and a modular architecture to visualize and explore heterogeneous genomic datasets.

Topics

Collections

Details

License:
GPL-3.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Linux
Programming Languages:
Java
Added:
7/18/2016
Last Updated:
11/25/2024

Operations

Publications

Thorvaldsdottir H, Robinson JT, Mesirov JP. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Briefings in Bioinformatics. 2012;14(2):178-192. doi:10.1093/bib/bbs017. PMID:22517427. PMCID:PMC3603213.

Documentation

Downloads

Links