mCSM-AB

mCSM-AB predicts changes in antibody-antigen binding affinity caused by mutations to support antibody engineering and escape-mutation identification.


Key Features:

  • Graph-Based Signatures: Uses graph-based signatures to model structural and functional relationships within antibody-antigen complexes.
  • Enhanced Predictive Accuracy: Demonstrates improved predictive accuracy for mutation-induced affinity changes compared to existing methods used in antibody engineering.

Scientific Applications:

  • Antibody Engineering: Enables optimization of antibody binding by predicting how specific mutations affect affinity.
  • Escape Mutation Prediction: Identifies potential escape mutations that reduce antibody recognition of antigens.
  • Drug Development: Informs rational design of monoclonal antibodies and other biologics by predicting mutation impacts on antibody-antigen interactions.

Methodology:

Analyzes the structural context of antibody-antigen complexes using graph-based signatures that capture interaction networks to assess mutation-induced changes in binding affinity.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
8/3/2017
Last Updated:
12/10/2018

Operations

Publications

Pires DE and Ascher DB. mCSM-AB: a web server for predicting antibody-antigen affinity changes upon mutation with graph-based signatures. Nucleic Acids Res. 2016; 44:W469-73. doi: 10.1093/nar/gkw458

PMID: 27216816

Documentation

Links