MemGen

MemGen generates multi-component lipid bilayer configurations for molecular dynamics (MD) simulations to model biologically realistic heterogeneous membranes.


Key Features:

  • Versatility in Lipid Types: Constructs membranes from user-provided structure files, accommodating diverse amphiphilic molecules and lipid species.
  • Compatibility with Force Fields: Supports all-atom and united-atom lipid representations and is compatible with multiple lipid force-field families for MD simulations.

Scientific Applications:

  • Biophysical Studies: Enables investigation of structural and dynamic properties of heterogeneous lipid bilayers at atomic resolution.
  • Drug Delivery Systems: Supports design and simulation of liposome membrane compositions for drug delivery research.
  • Membrane Protein Interactions: Facilitates study of protein-lipid interactions within complex membrane environments during MD simulations.

Methodology:

Assembles simulation systems from user-provided structure files to customize multi-component lipid bilayers for molecular dynamics simulations.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

Knight CJ, Hub JS. MemGen: a general web server for the setup of lipid membrane simulation systems. Bioinformatics. 2015;31(17):2897-2899. doi:10.1093/bioinformatics/btv292. PMID:25957354.

Documentation

Links