mesoSPIM initiative

mesoSPIM initiative enables volumetric light-sheet microscopy of centimeter-scale cleared and expanded biological samples, providing near-isotropic resolution with rapid acquisition for large-scale tissue imaging.


Key Features:

  • Open-Hardware Platform: Provides open-source hardware designs for constructing customizable light-sheet microscopes.
  • Compatibility: Accommodates cleared and expanded samples of various types and sizes, including centimeter-scale specimens.
  • High Resolution and Speed: Delivers near-isotropic spatial resolution and rapid volumetric acquisition to image large samples within minutes.

Scientific Applications:

  • Large-Scale Imaging: Enables mesoscale imaging of whole organs and large tissue sections for volumetric anatomical and structural studies.
  • Versatile Sample Compatibility: Supports imaging of diverse cleared and expanded sample preparations for comparative and multi-specimen experiments.

Methodology:

Employs light-sheet microscopy to perform volumetric imaging of cleared and expanded samples, reducing photodamage while enabling near-isotropic resolution and rapid capture of centimeter-scale specimens.

Topics

Details

Tool Type:
command-line tool
Added:
11/14/2019
Last Updated:
12/23/2020

Operations

Publications

Voigt FF, Kirschenbaum D, Platonova E, Pagès S, Campbell RAA, Kastli R, Schaettin M, Egolf L, van der Bourg A, Bethge P, Haenraets K, Frézel N, Topilko T, Perin P, Hillier D, Hildebrand S, Schueth A, Roebroeck A, Roska B, Stoeckli ET, Pizzala R, Renier N, Zeilhofer HU, Karayannis T, Ziegler U, Batti L, Holtmaat A, Lüscher C, Aguzzi A, Helmchen F. The mesoSPIM initiative: open-source light-sheet microscopes for imaging cleared tissue. Nature Methods. 2019;16(11):1105-1108. doi:10.1038/s41592-019-0554-0. PMID:31527839. PMCID:PMC6824906.

Links