MetaboCraft

MetaboCraft visualizes metabolomic networks and pathways as interactive 3D models within the Minecraft platform to enable exploration and interpretation of experimental metabolomics data.


Key Features:

  • Immersive 3D Visualization: Leverages the Minecraft engine to generate three-dimensional representations of metabolic networks and pathways.
  • Interactive Exploration: Enables real-time interaction and manipulation of 3D metabolic models to support dynamic exploration and hypothesis generation.
  • Integration of Experimental Results: Overlays user-generated experimental metabolomics data onto the 3D network visualizations to contextualize empirical findings.

Scientific Applications:

  • Educational Tool: Supports teaching of metabolic pathways and metabolomics concepts through interactive 3D visualization.
  • Research and Development: Facilitates exploration of metabolic interactions and hypothesis generation by allowing simulation of experimental conditions within the 3D models.
  • Data Interpretation and Presentation: Enhances interpretation and presentation of metabolomics datasets by mapping experimental data onto intuitive metabolic network visualizations.

Methodology:

Transforms static metabolic data into dynamic, interactive 3D models using the Minecraft platform and overlays user-generated experimental metabolomics data onto the visualized networks.

Topics

Details

Tool Type:
plugin
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Shell, JavaScript
Added:
6/3/2018
Last Updated:
11/25/2024

Operations

Publications

Megalios A, Daly R, Burgess K. MetaboCraft: building a Minecraft plugin for metabolomics. Bioinformatics. 2018;34(15):2693-2694. doi:10.1093/bioinformatics/bty102. PMID:29608638. PMCID:PMC6061834.

PMID: 29608638
PMCID: PMC6061834
Funding: - Wellcome Trust: 105614/Z/14/Z

Documentation