meTAline

metagenomics Taxonomic Assignation pipeline in Snakemake
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Topics

MetagenomicsTaxonomyMicrobiology

Collections

IMPaCT-Data

Details

License:
GPL-3.0
Maturity:
Emerging
Tool Type:
workflow
Programming Languages:
Python, R
Added:
4/21/2022
Last Updated:
3/13/2023

Operations

Data Inputs & Outputs

Taxonomic classification

Outputs

Genome indexing

Outputs

    Sequencing quality control

    Outputs

      Conversion

      Taxonomic classification

      Global alignment

      Sequence trimming

      Visualisation

      Outputs

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