metaXplor
metaXplor is an interactive viral and microbial metagenomic data manager. It aims at storing large volumes of user-defined sample, sequence and assignment information while providing a user-friendly fine-filtering web-interface. This online GUI also offers means to share datasets with collaborators, BLAST external sequences against them, and confirm assignments by running phylogenetic placement. metaXplor is available as a set of Docker containers that make it simple to deploy on various infrastructures.
Topics
Details
- License:
- AGPL-3.0
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Linux
- Added:
- 9/14/2020
- Last Updated:
- 4/22/2021
Operations
Documentation
User manual
https://metaxplor.cirad.fr/metaXplor/docIndex.jspHTML documentation is embedded in the web application
Downloads
- Container fileVersion: 1.0-betahttps://raw.githubusercontent.com/SouthGreenPlatform/metaXplor/master/docker-compose.ymlThis is a docker-compose file which upon execution automatically downloads required images