MetCCS
MetCCS predicts collision cross-section (CCS) values for metabolites to support structural identification in ion mobility-mass spectrometry (IMS)-based metabolomics.
Key Features:
- CCS prediction: Predicts collision cross-section (CCS) values for metabolites relevant to ion mobility-mass spectrometry (IMS) analyses.
- Rapid prediction: Computes CCS values quickly using computational models and molecular descriptors.
- Molecular-descriptor-based modeling: Uses molecular descriptors integrated into a predictive model to derive CCS estimates.
Scientific Applications:
- Metabolite identification: Provides predicted CCS values to increase confidence and aid structural elucidation of metabolites, including distinguishing structurally similar compounds.
- Metabolomics studies: Supports interpretation of complex biological samples and investigation of metabolic pathways and their implications for health and disease.
Methodology:
Employs molecular descriptors integrated into a predictive model to estimate CCS values for metabolites and simulate their behavior under ion mobility conditions.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 6/5/2018
- Last Updated:
- 11/24/2024
Operations
Publications
Zhou Z, Xiong X, Zhu Z. MetCCS predictor: a web server for predicting collision cross-section values of metabolites in ion mobility-mass spectrometry based metabolomics. Bioinformatics. 2017;33(14):2235-2237. doi:10.1093/bioinformatics/btx140. PMID:28334295.
PMID: 28334295
Funding: - National Natural Science Foundation of China: 21575151