MetFamily

Web application designed for the identification of regulated metabolite families. This is possible on the basis of metabolite profiles for a set of MS¹ features as well as one MS/MS spectrum for each MS¹ feature. Group-discriminating MS¹ features are identified using a PCA of metabolite profiles and metabolite families are identified using a HCA of MS/MS spectra. Regulated metabolite families are identified by considering group-discriminating MS¹ features from corporate metabolite families.

Topics

Details

License:
Freeware
Maturity:
Emerging
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Linux, Mac, Windows
Programming Languages:
R
Added:
4/13/2017
Last Updated:
11/16/2025

Operations

Data Inputs & Outputs

Publications

Documentation

User manual
http://pubs.acs.org/doi/abs/10.1021/acs.analchem.6b01569
Is available in the 'About' tab of the web app (http://msbi.ipb-halle.de/MetFamily/) and as supplement of the publication.