MEYE
MEYE performs real-time pupillometry to quantify pupil dynamics in humans and mice across experimental conditions including head-fixation, virtual reality, and during 2-photon calcium imaging.
Key Features:
- Real-Time Analysis: Performs online analysis of pupil size dynamics from live video streams or recorded videos.
- CNN-Based Quantification: Leverages a convolutional neural network (CNN) for automated pupil detection and measurement.
- Cross-Species Application: Applicable to both human and mouse subjects for comparative and translational studies.
- Noninvasive Measurement: Enables longitudinal, noninvasive monitoring of pupil dynamics without invasive procedures.
- Compatibility with Experimental Setups: Operates under head-fixation, in virtual reality environments, and concurrently with 2-photon calcium imaging.
- Sensitivity to Behavioral and Stimulus Effects: Detects locomotor-induced and stimulus-evoked changes in pupil size with sensitivity comparable to state-of-the-art commercial devices.
Scientific Applications:
- Neuropsychiatric Research: Quantifies pupil dynamics relevant to arousal and phenotypic alterations in conditions such as autism.
- Phenotypic Assessment in Mouse Models: Provides objective pupillometry metrics for assessing neurological and behavioral phenotypes in mice.
- Concurrent Imaging Correlates: Enables correlation of pupil dynamics with neural activity during 2-photon calcium imaging experiments.
Methodology:
MEYE applies a convolutional neural network (CNN) for online pupillometry to detect and quantify locomotor-induced and stimulus-evoked pupil size changes with sensitivity comparable to state-of-the-art commercial devices.
Topics
Collections
Details
- License:
- GPL-3.0
- Tool Type:
- web application
- Programming Languages:
- Python
- Added:
- 1/17/2022
- Last Updated:
- 1/17/2022
Operations
Publications
Mazziotti R, Carrara F, Viglione A, Lupori L, Lo Verde L, Benedetto A, Ricci G, Sagona G, Amato G, Pizzorusso T. MEYE: Web App for Translational and Real-Time Pupillometry. eneuro. 2021;8(5):ENEURO.0122-21.2021. doi:10.1523/eneuro.0122-21.2021. PMID:34518364. PMCID:PMC8489024.
PMID: 34518364
PMCID: PMC8489024
Funding: - H2020 AI4EU: GA 825619
- AI4Media: GA 951911
- Orphan Disease Center University of Pennsylvania: MDBR-19-103-CDKL5
Documentation
Links
Repository
https://github.com/fabiocarrara/meyeIssue tracker
https://github.com/fabiocarrara/meye/issues