MHADTI

MHADTI predicts drug-target interactions by embedding multiview heterogeneous information networks with hierarchical attention mechanisms to generate deep drug and target representations for DTI prediction.


Key Features:

  • Multiview Heterogeneous Information Networks: Constructs multiple drug and target similarity networks from diverse data sources and integrates known DTIs to build three distinct drug-target HIN views.
  • Hierarchical Attention Mechanisms: Employs hierarchical attention at node-level, semantic-level (meta-paths), and graph-level to weight nodes, meta-paths, and entire HINs.
  • Deep Feature Representation: Learns comprehensive embeddings for drugs and targets that capture structural and semantic information across the multiview HINs.
  • Multilayer Perceptron (MLP) Integration: Uses a multilayer perceptron on the learned embeddings to predict potential drug-target interactions.

Scientific Applications:

  • Novel DTI discovery: Predicts potential novel drug-target interactions to aid identification of new therapeutic relationships.
  • Drug repositioning and side-effect identification: Profiles drug-target interaction patterns to support drug repositioning efforts and identification of possible side effects.

Methodology:

Constructs multiview HINs from multisource similarity information, applies hierarchical attention (node-, semantic/meta-path-, and graph-level) to learn drug and target embeddings, and employs a multilayer perceptron for DTI prediction.

Topics

Details

License:
Not licensed
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
12/27/2022
Last Updated:
11/24/2024

Operations

Publications

Tian Z, Peng X, Fang H, Zhang W, Dai Q, Ye Y. MHADTI: predicting drug–target interactions via multiview heterogeneous information network embedding with hierarchical attention mechanisms. Briefings in Bioinformatics. 2022;23(6). doi:10.1093/bib/bbac434. PMID:36242566.

PMID: 36242566
Funding: - National Science Foundation of China: 61701073, 61801432, 62003308, 62176239