MHADTI
MHADTI predicts drug-target interactions by embedding multiview heterogeneous information networks with hierarchical attention mechanisms to generate deep drug and target representations for DTI prediction.
Key Features:
- Multiview Heterogeneous Information Networks: Constructs multiple drug and target similarity networks from diverse data sources and integrates known DTIs to build three distinct drug-target HIN views.
- Hierarchical Attention Mechanisms: Employs hierarchical attention at node-level, semantic-level (meta-paths), and graph-level to weight nodes, meta-paths, and entire HINs.
- Deep Feature Representation: Learns comprehensive embeddings for drugs and targets that capture structural and semantic information across the multiview HINs.
- Multilayer Perceptron (MLP) Integration: Uses a multilayer perceptron on the learned embeddings to predict potential drug-target interactions.
Scientific Applications:
- Novel DTI discovery: Predicts potential novel drug-target interactions to aid identification of new therapeutic relationships.
- Drug repositioning and side-effect identification: Profiles drug-target interaction patterns to support drug repositioning efforts and identification of possible side effects.
Methodology:
Constructs multiview HINs from multisource similarity information, applies hierarchical attention (node-, semantic/meta-path-, and graph-level) to learn drug and target embeddings, and employs a multilayer perceptron for DTI prediction.
Topics
Details
- License:
- Not licensed
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 12/27/2022
- Last Updated:
- 11/24/2024
Operations
Publications
Tian Z, Peng X, Fang H, Zhang W, Dai Q, Ye Y. MHADTI: predicting drug–target interactions via multiview heterogeneous information network embedding with hierarchical attention mechanisms. Briefings in Bioinformatics. 2022;23(6). doi:10.1093/bib/bbac434. PMID:36242566.