MiCroKit
MiCroKit catalogs experimentally validated proteins localized to the midbody, centrosome, and kinetochore to support studies of cell division fidelity.
Key Features:
- Comprehensive Protein Collection: Contains 1,489 microkit proteins from seven model organisms—Saccharomyces cerevisiae, Schizosaccharomyces pombe, Caenorhabditis elegans, Drosophila melanogaster, Xenopus laevis, Mus musculus, and Homo sapiens—each validated for subcellular localization by fluorescent microscopy.
- Orthologous Information: Provides orthologous relationships for each microkit protein to enable cross-species comparison and identification.
Scientific Applications:
- Cell Biology Research: Supports analysis of spatial and temporal assembly of protein complexes during mitosis by supplying localization-validated protein data.
- Comparative Genomics: Enables exploration of evolutionary conservation and functional inference via ortholog comparisons across the seven model organisms.
- Experimental Design: Assists identification and validation of candidate proteins involved in cell division by referencing experimentally localized microkit proteins.
Methodology:
Manually curated from scientific literature, including only proteins with unambiguous experimental evidence of subcellular localization (fluorescent microscopy).
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 3/27/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Ren J, Liu Z, Gao X, Jin C, Ye M, Zou H, Wen L, Zhang Z, Xue Y, Yao X. MiCroKit 3.0: an integrated database of midbody, centrosome and kinetochore. Nucleic Acids Research. 2009;38(suppl_1):D155-D160. doi:10.1093/nar/gkp784. PMID:19783819. PMCID:PMC2808993.
Documentation
User manual
http://microkit.biocuckoo.org/userguide.php