microManager
microManager controls automated microscopes and coordinates image acquisition for experiments requiring time-lapse, multi-channel, and z-stack imaging.
Key Features:
- Compatibility: Supports integration with microscopes from Leica, Nikon, Olympus, and Zeiss, and with scientific-grade cameras and peripherals such as stages, filter wheels, and shutters.
- Image Acquisition Strategies: Enables time-lapse imaging, multi-channel imaging, z-stacks, and combinations thereof for customizable acquisition protocols.
Scientific Applications:
- High-throughput imaging: Facilitates large-scale image acquisition workflows that require coordinated control of microscopy hardware.
- Live-cell imaging: Provides precise temporal control for repeated imaging of living cells over time.
- Developmental biology: Supports spatiotemporal imaging of specimens requiring detailed temporal and spatial resolution.
Methodology:
No computational methods or processing pipelines are specified in the provided description.
Topics
Details
- Tool Type:
- plugin
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- MATLAB, C++, Python
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Edelstein A, Amodaj N, Hoover K, Vale R, Stuurman N. Computer Control of Microscopes Using µManager. Current Protocols in Molecular Biology. 2010;92(1). doi:10.1002/0471142727.mb1420s92. PMID:20890901. PMCID:PMC3065365.