MiModD

MiModD maps and annotates mutations from whole-genome sequencing (WGS) data to identify causal variants in genetic studies.


Key Features:

  • Versatility: Supports multiple mapping-by-sequencing protocols.
  • WGS data support: Analyzes whole-genome sequencing (WGS) data for variant discovery.
  • Mutation analysis: Performs mapping, identification, and annotation of mutations.

Scientific Applications:

  • Mutation mapping in model organisms: Uses WGS to pinpoint mutations associated with phenotypic changes in model organisms.
  • Genetics, genomics, and evolutionary biology: Facilitates identification and annotation of causal variants for studies in genetics, genomics, and evolutionary biology.

Methodology:

Analyzes WGS data using mapping-by-sequencing protocols to map, identify, and annotate mutations.

Topics

Details

License:
GPL-3.0
Maturity:
Mature
Tool Type:
command-line tool, workflow
Operating Systems:
Linux, Mac
Programming Languages:
Python
Added:
10/23/2024
Last Updated:
10/23/2024

Operations

Publications

Maier W. MiModD - Mutation Identification in Model Organism Genomes [Internet]. Zenodo; 2018. Available from: https://zenodo.org/record/1189838

Documentation

Training material
https://gxy.io/GTN:T00312
Training on using the tool through the Galaxy platform