miRcounts

Generates pre-miRNA and mature miRNA count tables from read alignments to pre-miRNA sequences and a gff file, both downloaded from mirBase. Produces also read coverage plots of pre-miRNAs.

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Details

License:
MIT
Maturity:
Mature
Cost:
Free of charge
Tool Type:
command-line tool
Programming Languages:
Python, R, Shell
Added:
6/18/2026
Last Updated:
7/2/2026

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