MITOS

MITOS performs de novo annotation of metazoan mitochondrial genomes to produce consistent, high-quality annotations of protein-coding genes, rRNAs, and tRNAs for use in animal phylogenetics and molecular evolution studies.


Key Features:

  • De Novo Annotation: Performs de novo annotation of protein-coding genes, rRNAs, and tRNAs without relying on pre-existing databases.
  • Consistency and Quality: Generates annotations with coverage and quality comparable to NCBI RefSeq and MitoZoa.
  • Error Reduction: Reduces errors such as misassignments of reading directions, erroneous gene names, and missing or false-positive RNA gene annotations.

Scientific Applications:

  • Animal Phylogenetics: Provides reliable mitogenomic annotations to support phylogenetic analyses of metazoans.
  • Molecular Evolution Studies: Supplies consistent mitochondrial gene annotations for comparative and molecular evolution investigations.

Methodology:

Computational tools and strategies compute de novo annotations to avoid biases introduced by manual curation.

Topics

Details

Tool Type:
web application, workflow
Added:
5/24/2018
Last Updated:
11/24/2024

Operations

Data Inputs & Outputs

Genome annotation

Publications

Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. MITOS: Improved de novo metazoan mitochondrial genome annotation. Molecular Phylogenetics and Evolution. 2013;69(2):313-319. doi:10.1016/j.ympev.2012.08.023. PMID:22982435.

Documentation