MMHub
MMHub aggregates electrospray ionization tandem mass spectrometry (ESI-MS2) spectra and curated annotations of small chemical compounds from mulberry leaves, including flavonoids, amino acids, alkaloids, and vitamins, to support metabolomic analysis.
Key Features:
- Mass Spectrometry Data Repository: MMHub v1.0 stores ESI-MS2 data for metabolites with molecular weights <1000 Da, comprising 936 spectra from 91 distinct mulberry resources analyzed in two biological duplicates.
- Metabolite Identification and Annotation: The database contains 124 metabolites identified or tentatively annotated, with detailed chemical structures provided for 90 metabolites.
- Supporting Information and Cross-References: Entries include PubChem compound details, molecular formulas, and metabolite classifications organized into an MS2 spectral tag library.
Scientific Applications:
- Screening of mulberry resources: Enables screening and comparative assessment of mulberry germplasm and specific metabolites across resources.
- Bioactive compound discovery: Supports identification of potential bioactive compounds with therapeutic or nutritional relevance.
- Comparative metabolomics: Facilitates analysis of metabolic diversity and composition across mulberry samples.
- Support for applied research: Provides spectral and annotation data applicable to pharmacology and agricultural studies.
Methodology:
Data were generated by electrospray ionization tandem mass spectrometry (ESI-MS2) and organized into an MS2 spectral tag library.
Topics
Details
- Tool Type:
- web application
- Added:
- 1/18/2021
- Last Updated:
- 2/26/2021
Operations
Publications
Li D, Ma B, Xu X, Chen G, Li T, He N. MMHub, a database for the mulberry metabolome. Database. 2020;2020. doi:10.1093/database/baaa011. PMID:32159764. PMCID:PMC7065671.
PMID: 32159764
PMCID: PMC7065671
Funding: - China Postdoctoral Science Foundation: 2017M612884
- Fundamental Research Funds for the Central Universities: SWU118040, XDJK2017C076
- Chongqing Research Program of Basic Research and Frontier Technology: cstc2018jcyjAX0407
- National Key Research and Development Program: 2018YFD000602