ModelArray
ModelArray performs mass-univariate statistical analysis of fixel-wise diffusion MRI data to quantify white matter organization and test linear and nonlinear associations.
Key Features:
- Support for statistical models: Implements mass-univariate analyses using linear models and generalized additive models (GAMs) to test linear and nonlinear effects on fixel-wise metrics.
- Fixel-wise diffusion MRI support: Operates on fixel-wise metrics derived from diffusion MRI to enable fiber-specific analyses within voxels for white matter studies.
- Scalability and memory efficiency: Provides a memory-efficient implementation with detailed memory profiling demonstrating minimal memory usage and the ability to handle large datasets on standard personal computers.
Scientific Applications:
- Philadelphia Neurodevelopmental Cohort analysis: Applied to fixel-wise diffusion images from the Philadelphia Neurodevelopmental Cohort (n = 938) to identify nonlinear developmental effects in white matter.
- Lifespan and developmental modeling: Enables detection and characterization of nonlinear white matter changes across the lifespan using GAMs.
Methodology:
Mass-univariate statistical analysis on fixel-wise diffusion MRI metrics using linear models and generalized additive models (GAMs).
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- library
- Programming Languages:
- R
- Added:
- 11/7/2023
- Last Updated:
- 11/24/2024
Operations
Publications
Zhao C, Tapera TM, Bagautdinova J, Bourque J, Covitz S, Gur RE, Gur RC, Larsen B, Mehta K, Meisler SL, Murtha K, Muschelli J, Roalf DR, Sydnor VJ, Valcarcel AM, Shinohara RT, Cieslak M, Satterthwaite TD. ModelArray: An R package for statistical analysis of fixel-wise data. NeuroImage. 2023;271:120037. doi:10.1016/j.neuroimage.2023.120037. PMID:36931330. PMCID:PMC10119782.
PMID: 36931330
PMCID: PMC10119782
Funding: - National Science Foundation: DGE-1845298
- National Institutes of Health: 5T32DC000038, K99MH127293, R01EB022573, R01MH112847, R01MH113550, R01MH119185, R01MH120174, R01MH120482, R01MH123550, R37MH125829, RF1MH116920