MoRFCHiBi
MoRFCHiBi predicts molecular recognition features (MoRFs) in protein sequences to identify short segments within intrinsically disordered regions that undergo disorder-to-order transitions upon binding globular protein domains.
Key Features:
- MoRF identification: Detects short MoRF segments located in longer intrinsically disordered regions of proteins that undergo disorder-to-order transitions upon binding globular protein domains.
- MoRFCHiBi: Basic predictor optimized for integration into larger computational workflows, balancing speed and accuracy.
- MoRFCHiBi_Light: High-throughput variant prioritizing processing speed for large-scale sequence analyses.
- MoRFCHiBi_Web: Accuracy-focused variant that provides higher precision at the expense of processing speed.
- Precision improvement: Computational approach demonstrates more than double the precision compared to other available MoRF predictors.
Scientific Applications:
- Cellular signaling and regulation: Identification of MoRFs to study roles of disordered binding segments in cellular signaling and regulatory processes.
- Protein interactions and mechanisms: Analysis of disorder-to-order transitions to improve understanding of protein–protein interactions and regulatory mechanisms.
- Functional analysis of MoRFs: Exploration of the functional implications of MoRFs in protein biology.
Methodology:
Computational prediction using three variants (MoRFCHiBi, MoRFCHiBi_Light, MoRFCHiBi_Web) to detect MoRFs in protein sequences, yielding >2× precision relative to other predictors.
Topics
Details
- License:
- Apache-2.0
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux
- Added:
- 8/3/2017
- Last Updated:
- 11/24/2024
Operations
Data Inputs & Outputs
Protein feature detection
Inputs
Outputs
Publications
Malhis N, Jacobson M, Gsponer J. MoRFchibi SYSTEM: software tools for the identification of MoRFs in protein sequences. Nucleic Acids Research. 2016;44(W1):W488-W493. doi:10.1093/nar/gkw409. PMID:27174932. PMCID:PMC4987941.
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