mosaic

mosaic quantifies the mosaic structure of one-dimensional hybrid zones by fitting likelihood-based step-wise models to estimate spatial genetic patchiness.


Key Features:

  • Likelihood-based step-wise model fitting: Fits step-wise models to hybrid zone data using a likelihood approach to estimate spatial genetic composition.
  • Quantification of mosaicity: Estimates the degree of mosaic structure (patchiness or heterogeneity) within hybrid zones.
  • Application to simulated and empirical data: Applies the likelihood method to both simulated datasets and empirical observations for validation and comparison.
  • Simulation-based exploration: Uses computer simulations to investigate the roles of dispersal and assortative mating in hybrid zone formation and persistence.
  • Selection scenario consideration: Incorporates analyses of frequency-dependent selection and selection against heterozygotes as factors influencing mosaic structure.

Scientific Applications:

  • Investigating dispersal and assortative mating: Examines how long-distance dispersal and assortative mating generate and maintain patchy distributions in hybrid zones.
  • Analyzing frequency-dependent selection: Studies how assortative mating can reduce mating success of rare males and create positive within-patch frequency-dependent selection.
  • Exploring heterozygote disadvantage: Evaluates how selection against heterozygotes can disadvantage rare types and preserve mosaic structure.
  • Population genetics and evolutionary biology studies: Provides a framework for testing hypotheses about evolutionary processes stabilizing hybrid zones.

Methodology:

Fits step-wise models via a likelihood-based approach to hybrid zone data and employs computer simulations to investigate dispersal, assortative mating, and selection scenarios.

Topics

Details

Tool Type:
command-line tool
Operating Systems:
Linux, Windows, Mac
Programming Languages:
R
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

M'Gonigle LK, FitzJohn RG. ASSORTATIVE MATING AND SPATIAL STRUCTURE IN HYBRID ZONES. Evolution. 2010;64(2):444-455. doi:10.1111/j.1558-5646.2009.00838.x. PMID:19780815.

Documentation

Links