MOSCA

Meta-Omics Software for Community Analysis

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Topics

Metagenomics Metatranscriptomics Proteomics

Details

License:: GPL-3.0
Maturity:: Mature
Cost:: Free of charge
Tool Type:: command-line tool
Operating Systems:: Mac, Linux
Programming Languages:: Python, R
Added:: 4/29/2021
Last Updated:: 5/10/2021

Operations

Data Inputs & Outputs

Genome annotation

Inputs

Outputs

Other operations do not define inputs or outputs.

Publications

Sequeira JC, Rocha M, Madalena Alves M, Salvador AF. MOSCA: An Automated Pipeline for Integrated Metagenomics and Metatranscriptomics Data Analysis. Advances in Intelligent Systems and Computing. 2018. doi:10.1007/978-3-319-98702-6_22.

DOI: 10.1007/978-3-319-98702-6_22

Documentation

Quick start guide

https://github.com/iquasere/MOSCA/wiki/Installing-and-running-MOSCA

Command-line options

https://github.com/iquasere/MOSCA/wiki/Parameters-of-MOSCA

FAQ

https://github.com/iquasere/MOSCA/wiki/Technical-documentation

Release notes

https://github.com/iquasere/MOSCA/releases

Command-line options

https://github.com/iquasere/MOSCA/wiki/Partial-runs

Downloads

Source code
Version: 1.3.6
https://github.com/iquasere/MOSCA/archive/refs/tags/1.3.6.tar.gz

Links

Issue tracker

https://github.com/iquasere/MOSCA/issues

Software catalogue

https://anaconda.org/bioconda/mosca

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