motifcounter
The package is in particular useful for long motifs and/or relaxed choices of score thresholds, because the implemented algorithms efficiently bypass the need for enumerating a (potentially huge) set of DNA words that can give rise to a motif match.
Topics
Collections
Details
- License:
- GPL-2.0
- Cost:
- Free of charge
- Tool Type:
- library
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- R
- Added:
- 7/22/2018
- Last Updated:
- 12/10/2018
Operations
Publications
Wolfgang Kopp [Aut, Cre]. motifcounter [Internet]. Bioconductor; 2017. Available from: https://bioconductor.org/packages/motifcounter