motoRneuron

motoRneuron performs time-domain analysis of motor unit synchronization in R to quantify temporal synchrony and common input between motor neuron discharge trains.


Key Features:

  • R implementation: Implemented in R for analysis of motor unit discharge and action potential train data.
  • Cross-correlation histogram analysis: Generates cross-correlation histograms with configurable bin width (e.g., 1 ms) and analyzes first-order recurrence intervals.
  • Peak detection methods: Implements cumulative sum method, z-score method, and a subjective visual method for detecting peaks in cross-correlation histograms.
  • Synchronization indices: The mu_synch function computes six indices: Common Input Strength (CIS), k', k' - 1, E, S, and Synch Index.
  • Data input: Processes motor unit action potential trains recorded with fine-wire electromyography during tasks such as isometric finger flexion.

Scientific Applications:

  • Motor control research: Quantifies temporal relationships between motor neurons and muscle fibers to investigate neural control mechanisms of force generation.
  • Neuromuscular disorder studies: Assesses alterations in motor unit synchronization associated with neuromuscular conditions.
  • Rehabilitation and intervention evaluation: Evaluates effects of interventions on motor unit synchrony.
  • Method comparison and reproducibility: Enables comparison of peak detection and index computation methods, with reported variability between methods (e.g., a 45% difference in CIS between visual and z-score methods).

Methodology:

Processes motor unit action potential trains (fine-wire electromyography, e.g., isometric finger flexion), computes cross-correlation histograms with specified bin width (e.g., 1 ms) focusing on first-order recurrence intervals, detects peaks using cumulative sum, z-score, or subjective visual methods, and computes synchronization indices (CIS, k', k' - 1, E, S, Synch Index) via the mu_synch function.

Topics

Details

License:
GPL-2.0
Tool Type:
command-line tool
Programming Languages:
R, MATLAB, LabVIEW
Added:
1/14/2020
Last Updated:
12/29/2020

Operations

Publications

Tweedell AJ, Tenan MS. motoRneuron: an open-source R toolbox for time-domain motor unit analyses. PeerJ. 2019;7:e7907. doi:10.7717/peerj.7907. PMID:31844560. PMCID:PMC6910107.

PMID: 31844560
PMCID: PMC6910107
Funding: - Department of Defense Human Systems Integration (Cybernetics) research line at the U.S. Army Research Laboratory: 74-A-HRCY

Links