motoRneuron
motoRneuron performs time-domain analysis of motor unit synchronization in R to quantify temporal synchrony and common input between motor neuron discharge trains.
Key Features:
- R implementation: Implemented in R for analysis of motor unit discharge and action potential train data.
- Cross-correlation histogram analysis: Generates cross-correlation histograms with configurable bin width (e.g., 1 ms) and analyzes first-order recurrence intervals.
- Peak detection methods: Implements cumulative sum method, z-score method, and a subjective visual method for detecting peaks in cross-correlation histograms.
- Synchronization indices: The mu_synch function computes six indices: Common Input Strength (CIS), k', k' - 1, E, S, and Synch Index.
- Data input: Processes motor unit action potential trains recorded with fine-wire electromyography during tasks such as isometric finger flexion.
Scientific Applications:
- Motor control research: Quantifies temporal relationships between motor neurons and muscle fibers to investigate neural control mechanisms of force generation.
- Neuromuscular disorder studies: Assesses alterations in motor unit synchronization associated with neuromuscular conditions.
- Rehabilitation and intervention evaluation: Evaluates effects of interventions on motor unit synchrony.
- Method comparison and reproducibility: Enables comparison of peak detection and index computation methods, with reported variability between methods (e.g., a 45% difference in CIS between visual and z-score methods).
Methodology:
Processes motor unit action potential trains (fine-wire electromyography, e.g., isometric finger flexion), computes cross-correlation histograms with specified bin width (e.g., 1 ms) focusing on first-order recurrence intervals, detects peaks using cumulative sum, z-score, or subjective visual methods, and computes synchronization indices (CIS, k', k' - 1, E, S, Synch Index) via the mu_synch function.
Topics
Details
- License:
- GPL-2.0
- Tool Type:
- command-line tool
- Programming Languages:
- R, MATLAB, LabVIEW
- Added:
- 1/14/2020
- Last Updated:
- 12/29/2020
Operations
Publications
Tweedell AJ, Tenan MS. motoRneuron: an open-source R toolbox for time-domain motor unit analyses. PeerJ. 2019;7:e7907. doi:10.7717/peerj.7907. PMID:31844560. PMCID:PMC6910107.